This function is used to extract the pre-defined driver lists of human or mouse.
Usage
getDriverList(species_type = "hg", driver_type = "TF")
Arguments
- species_type
Character, species of the driver lists to be extracted: "hg" for human, "mm" for mouse. Default: "hg".
- driver_type
Character, type of drivers to be extracted: "TF" for transcriptional factor, "SIG" for signaling genes, and "TF_SIG" for both. Default: "TF".
Value
A vector of pre-defined driver genes
Examples
## 1. Get the TF driver list of human
hg_tf <- getDriverList(species_type = "hg", driver_type = "TF")
## 2. Get the total driver list, including both TF and SIG, of mouse
mm_driver <- getDriverList(species_type = "mm", driver_type = "TF_SIG")